POST api/v1.0/search

Run a doRiNA search

Parameters

Required

No required parameters

Message

Name	Type	Description	Default	Example Values	Required
uuid	string	UUID assigned to session when starting the search	-	f2b4e02-1c94-443b-9326-901dc8ebd351	yes
assembly	string	name of an assembly	-	hg19	yes
set_a	array of strings	ids of regulators to use for set A	-	["PARCLIP_PUM2_hg19", "hsa-miR-221-3p"]	yes
match_a	string	any or all regulators of set A should match	any	all	no
region_a	string	choice of (any/CDS/5prime/3prime/intron/intergenic)	any	CDS	no
window_a	integer	regulators of set A must match within a window of x bp	-1 (disabled)	100	no
set_b	array of strings	ids of regulators to use for set b	[]	["PARCLIP_PUM2_hg19", "hsa-miR-221-3p"]	no
match_b	string	any or all regulators of set B should match	any	all	no
region_b	string	choice of (any/CDS/5prime/3prime/intron/intergenic)	any	CDS	no
window_b	integer	regulators of set B must match within a window of x bp	-1 (disabled)	100	no
genes	array of strings	RefSeq IDs of genes to limit search to	["all"]	["NM_000023", "NM_004711"]	no

Examle Request

curl -d set_a[]=PARCLIP_PUM2_hg19 -d set_a[]=hsa-miR-221-3p -d assembly=hg19 -d match_a=all -d uuid=custom-uuid -X POST http://dorina.mdc-berlin.de/api/v1.0/search

{
  "state": "pending",
  "uuid": "custom-uuid"
}